STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22811.1Conserved hypothetical protein; Protein of unknown function DUF1599 (PF07659). (180 aa)    
Predicted Functional Partners:
AEK22812.1
Triosephosphate isomerase; N-terminus: TMH(LipoP); 5 transmembrane domains; DoxX (PF07681).
 
     0.917
AEK22810.1
Hypothetical protein; N-terminus: SpI(LipoP); 1 transmembrane domain.
 
     0.788
AEK23136.1
N-acetylglucosamine kinase-like protein.
  
     0.698
AEK23445.1
Conserved hypothetical protein.
  
     0.573
AEK23043.1
Conserved hypothetical protein.
  
     0.567
AEK22284.1
Gliding motility protein GldL; N-terminus: TMH(LipoP); 2 transmembrane domains; Gliding motility-associated protein, GldL (TIGR03513).
  
     0.550
AEK22817.1
Adaptor protein ClpS, core (PF02617); Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (SSF54736); Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (G3DSA:3.30.1390.10); Protein involved in protein catabolic process; Belongs to the ClpS family.
 
     0.537
AEK23155.1
Short=AE epimerase;Short=AEE;EC=5.1.1.n1; Mandelate racemase/muconate lactonizing enzyme, C-terminal (PF01188); Undefined Gene3D domain (G3DSA:3.20.20.120); Enolase C-terminal domain-like (SSF51604); Mandelate racemase/muconate lactonizing enzyme, conserved site (PS00909); Enolase N-terminal domain-like (SSF54826); MUCONATE CYCLOISOMERASE (PTHR13794:SF7); Mandelate racemase/muconate lactonizing enzyme (PTHR13794); Protein involved in catalytic activity, metabolic process and cellular amino acid catabolic process.
  
     0.536
rnpA
Protein C5; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.526
AEK23979.1
Riboflavin synthase subunit alpha; Protein of unknown function DUF177 (PF02620).
  
     0.510
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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