STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22817.1Adaptor protein ClpS, core (PF02617); Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (SSF54736); Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (G3DSA:3.30.1390.10); Protein involved in protein catabolic process; Belongs to the ClpS family. (93 aa)    
Predicted Functional Partners:
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
 
     0.853
AEK22815.1
Putative Sulfate-transporting ATPase; AltName: Full=ORF1; P-loop containing nucleoside triphosphate hydrolases (SSF52540); Undefined Gene3D domain (G3DSA:3.40.50.300); ATP BINDING CASSETE (ABC) TRANSPORTER (PTHR19222); ABC TRANSPORTER (PTHR19222:SF15); ABC transporter-like (PS50893); ATPase, AAA+ type, core (SM00382); ABC transporter-like (PF00005); Protein involved in ATP binding, ATPase activity, nucleotide binding and nucleoside-triphosphatase activity.
       0.755
AEK23182.1
DNA-binding protein Dps (PS00819); DNA-binding protein Dps (PR01346); Ferritin/ribonucleotide reductase-like (SSF47240); DNA-binding protein Dps (PIRSF005900); DNA-binding protein Dps (PS00818); Ferritin-related (G3DSA:1.20.1260.10); Ferritin/Dps protein (PF00210); Protein involved in ferric iron binding, oxidoreductase activity, transition metal ion binding, cellular iron ion homeostasis, response to stress and oxidation reduction; Belongs to the Dps family.
   
 
 0.744
clpB
Chaperone protein clpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.718
AEK23248.1
Chaperone protein clpB; Undefined Gene3D domain (G3DSA:3.40.50.300); Clp, N-terminal (PF02861); P-loop containing nucleoside triphosphate hydrolases (SSF52540); Clp ATPase, C-terminal (PF10431); RNA polymerase sigma factor 54, interaction (PS00675); UvrB/UvrC protein (PS50151); Chaperonin ClpA/B, conserved site (PS00870); Chaperonin clpA/B (PR00300); ATP-DEPENDENT CLP PROTEASE (PTHR11638); Double Clp-N motif (SSF81923); ATPase, AAA-type, core (PF00004); ATPase, AAA+ type, core (SM00382); Chaperonin clpA/B (PS00871); ATPase, AAA-2 (PF07724); ATP-DEPENDENT CLP PROTEASE (PTHR11638:SF19); [...]
  
 
 0.718
AEK23553.1
Conserved hypothetical protein; 1 transmembrane domain.
  
     0.713
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
       0.689
clpP
Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
 
 0.654
AEK23043.1
Conserved hypothetical protein.
  
     0.650
AEK24417.1
Conserved hypothetical protein; Protein of unknown function DUF2480 (PF10652).
  
     0.620
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.