STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22849.1N-terminus: TMH(LipoP); Contains:RecName: Full=Phosphatidylserine decarboxylase alpha chain;Contains:RecName: Full=Phosphatidylserine decarboxylase beta chain; 2 transmembrane domains; Phosphatidylserine decarboxylase-related protein (TIGR00164); Phosphatidylserine decarboxylase-related (PF02666); Protein involved in phosphatidylserine decarboxylase activity, cofactor binding, phosphatidylethanolamine biosynthetic process and phospholipid biosynthetic process. (226 aa)    
Predicted Functional Partners:
AEK23089.1
Phosphatidylserine synthase; N-terminus: TMH(LipoP); AltName: Full=Phosphatidylserine synthase; 7 transmembrane domains; CDP-alcohol phosphatidyltransferase (PF01066); CDP-alcohol phosphatidyltransferase (PS00379); Protein involved in phosphotransferase activity, for other substituted phosphate groups and phospholipid biosynthetic process; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.983
AEK23905.1
N-terminus: SpI(LipoP); AltName: Full=Phosphatidylcholine 1-acylhydrolase;Flags: Precursor; Phospholipase A1 (G3DSA:2.40.230.10); Phospholipase A1 (PF02253); Phospholipase A1 (SSF56931); Phospholipase A1 (PR01486); Protein involved in phospholipase activity and lipid metabolic process.
     
  0.900
AEK22848.1
CDP-DAG synthase; N-terminus: TMH(LipoP); AltName: Full=CDP-diglyceride pyrophosphorylase;AltName: Full=CDP-diglyceride synthase;AltName: Full=CDP-diacylglycerol synthase;Short=CDS;AltName: Full=CTP:phosphatidate cytidylyltransferase;AltName: Full=CDP-DG synthase;AltName: Full=CDP-DAG synthase; 8 transmembrane domains; Phosphatidate cytidylyltransferase (PF01148); PHOSPHATIDATE CYTIDYLYLTRANSFERASE (PTHR13773); Phosphatidate cytidylyltransferase (PS01315); Protein involved in transferase activity, transferring phosphorus-containing groups; Belongs to the CDS family.
     
 0.889
AEK22847.1
Conserved hypothetical protein; Lactate utilization protein B/C (PF02589).
       0.831
ftsH
Cell division protease ftsH-like protein 10; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 
 0.711
rsfS
Uncharacterized protein ybeB; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
    0.656
AEK22850.1
Protein of unknown function DUF28 (PTHR12532); Protein of unknown function DUF28 (MF_00693); Integrase, N-terminal zinc-binding domain-like (G3DSA:1.10.10.200); Protein of unknown function DUF28 (PF01709); Undefined Gene3D domain (G3DSA:3.30.1270.10); Protein of unknown function DUF28 (TIGR01033); Protein of unknown function DUF28 (SSF75625).
       0.605
AEK22844.1
Biotin--protein ligase; Includes:RecName: Full=Biotin operon repressor;Includes:RecName: Full=Biotin--[acetyl-CoA-carboxylase] synthetase;AltName: Full=Biotin--protein ligase; Biotin/lipoate A/B protein ligase (PF03099); Biotin--acetyl-CoA-carboxylase ligase (TIGR00121); Undefined Gene3D domain (G3DSA:3.30.930.10); Class II aaRS and biotin synthetases (SSF55681); Biotin--acetyl-CoA-carboxylase ligase (PTHR12835); Protein involved in catalytic activity, biotin-[acetyl-CoA-carboxylase] ligase activity and protein modification process.
       0.434
rimM
Ribosome maturation factor rimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.
 
     0.429
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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