STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22925.1Hypothetical protein; Weak similarity to UniProt:B8I736; P-loop containing nucleoside triphosphate hydrolases (SSF52540); Undefined Gene3D domain (G3DSA:3.40.50.300); TerB (PF05099); GTP-binding protein, HSR1-related (PF01926); Protein involved in GTP binding. (807 aa)    
Predicted Functional Partners:
AEK22926.1
GTP-binding protein HSR1-related protein; Undefined Gene3D domain (G3DSA:3.40.50.300); P-loop containing nucleoside triphosphate hydrolases (SSF52540); GTP-binding protein, HSR1-related (PF01926); GTP1/OBG (PR00326); Protein involved in GTP binding.
 
    
0.841
AEK22924.1
Hypothetical protein; 1 transmembrane domain.
       0.773
AEK22927.1
Conserved hypothetical protein.
       0.773
AEK22923.1
Conserved hypothetical protein.
       0.757
AEK22922.1
Hypothetical protein.
       0.480
AEK22189.1
Hypothetical protein; Weak similarity to UniProt:Q8CGY8; Tetratricopeptide repeat (SM00028); TPR-like (SSF48452); Tetratricopeptide repeat-containing (PS50293); TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (PTHR23083:SF20); Tetratricopeptide repeat (PS50005); Tetratricopeptide-like helical (G3DSA:1.25.40.10); TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (PTHR23083); Tetratricopeptide TPR-1 (PF00515); Protein involved in binding.
  
     0.405
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.