STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menGMenaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (258 aa)    
Predicted Functional Partners:
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 0.908
AEK23021.1
PorT protein; N-terminus: SpI(LipoP); 1 transmembrane domain.
       0.806
AEK23020.1
Conserved hypothetical protein; N-terminus: TMH(LipoP); Protein of unknown function DUF2911 (PF11138).
       0.504
AEK23024.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.497
AEK24069.1
N-terminus: TMH(LipoP); AltName: Full=Homoserine O-trans-acetylase;Short=Homoserine transacetylase;Short=HTA; 1 transmembrane domain; Alpha/beta hydrolase fold-1 (PF00561); alpha/beta-Hydrolases (SSF53474).
  
  
 0.468
AEK24070.1
Putative homoserine O-acetyltransferase; Weak similarity to UniProt:Q73UB0.
  
  
 0.468
AEK23025.1
Outer membrane protein omp85; Surface exposed; N-terminus: SpI(LipoP); Flags: Precursor; Surface antigen variable number (PF07244); Bacterial surface antigen (D15) (PF01103); Outer membrane assembly protein, YaeT (PIRSF006076); Outer membrane assembly protein, YaeT (TIGR03303).
  
    0.455
AEK23023.1
Conserved hypothetical protein; N-terminus: SpI(SignalPHMM).
       0.435
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
    0.428
AEK23026.1
N-terminus: SpI(SignalPHMM); Outer membrane chaperone Skp (OmpH) (PF03938); Outer membrane chaperone Skp (OmpH) (SSF111384); Protein involved in protein binding.
  
    0.401
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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