STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK23051.1Efflux pump membrane transporter bepE; N-terminus: TMH(LipoP); 12 transmembrane domains; Multidrug efflux transporter AcrB pore domain; PATCHED-RELATED (PTHR10796); Major intrinsic protein (PS00221); Multidrug efflux transporter AcrB transmembrane domain (SSF82866); PN1, PN2, PC1 and PC2 subdomains (SSF82693); Acriflavin resistance protein (PR00702); Hydrophobe/amphiphile (TIGR00915); DN and DC subdomains (SSF82714); Multidrug efflux transporter AcrB TolC docking domain; Acriflavin (PF00873); DISPATCHED-RELATED (PTHR10796:SF33); Protein involved in transporter activity and transport; B [...] (1049 aa)    
Predicted Functional Partners:
AEK23049.1
Outer membrane protein oprM; N-terminus: SpII(LipoP); Flags: Precursor; 1 transmembrane domain; Outer membrane efflux protein (PF02321); Integral outer membrane protein TolC, efflux pump component (SSF56954); RND efflux system, outer membrane lipoprotein, NodT (TIGR01845); Protein involved in transporter activity, lipid binding and transport.
 
 0.949
AEK23052.1
Efflux pump periplasmic linker bepF; N-terminus: SpII(LipoP); HlyD-like secretion proteins (Pfam 00529) (SSF111369); Secretion protein HlyD (PF00529); Secretion protein HlyD (TIGR01730); Protein involved in protein transporter activity and protein secretion; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.928
AEK24486.1
Hypothetical protein; N-terminus: SpII(LipoP); HlyD-like secretion proteins (Pfam 00529) (SSF111369); Secretion protein HlyD (PF00529); Secretion protein HlyD (TIGR01730); Protein involved in protein transporter activity and protein secretion; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.744
AEK22357.1
N-terminus: SpI(LipoP); AltName: Full=Cation efflux system protein czcC;Flags: Precursor; 1 transmembrane domain; Integral outer membrane protein TolC, efflux pump component (SSF56954); Outer membrane efflux protein (PF02321); Protein involved in transporter activity and transport.
 
 
 0.520
AEK22907.1
UPF0092 membrane protein; YajC (PF02699); YajC (TIGR00739).
    
 
 0.517
AEK23644.1
Sensor protein evgS; N-terminus: TMH(LipoP); Flags: Precursor; 3 transmembrane domains; Signal transduction histidine kinase, homodimeric (SSF47384); ATPase-like, ATP-binding domain (SSF55874); TETRACYCLINE RESISTANCE ELEMENT REGULATOR RTEA - BACTEROIDES THETAIOTAOMICRON (PTHR23283:SF38); Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (SM00388); Signal transduction histidine kinase, phosphotransfer (Hpt) domain (SSF47226); Undefined Gene3D domain (G3DSA:1.10.287.240); ATPase-like, ATP-binding domain (PF02518); Signal transduction histidine kinase, [...]
 
 
 0.473
AEK24491.1
N-terminus: SpI(LipoP); Outer membrane efflux protein (PF02321); Integral outer membrane protein TolC, efflux pump component (SSF56954); Protein involved in transporter activity and transport.
  
 
 0.460
AEK22178.1
Conserved hypothetical protein; N-terminus: SpI(LipoP); 1 transmembrane domain; Integral outer membrane protein TolC, efflux pump component (SSF56954); Outer membrane efflux protein (PF02321); Protein involved in transporter activity and transport.
  
 
 0.445
AEK24250.1
Autoinducer 2 sensor kinase/phosphatase luxQ; N-terminus: SpII(ProfileScan); 1 transmembrane domain; Signal transduction histidine kinase, homodimeric (SSF47384); ATPase-like, ATP-binding domain (SSF55874); Tetratricopeptide repeat (SM00028); Homeodomain-related (G3DSA:1.10.10.60); Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (SM00388); Undefined Gene3D domain (G3DSA:1.10.287.240); ATPase-like, ATP-binding domain (PF02518); Signal transduction response regulator, receiver domain (PF00072); Tetratricopeptide-like helical (G3DSA:1.25.40.10); HCP-l [...]
   
 
 0.430
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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