STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK23100.1DNA methylase, N-6 adenine-specific, conserved site (PS00092); N6 adenine-specific DNA methyltransferase, N12 class (PR00507); S-adenosyl-L-methionine-dependent methyltransferases (SSF53335); Undefined Gene3D domain (G3DSA:3.40.50.150); Eco57I (PF07669); Protein involved in nucleic acid binding, methyltransferase activity and methylation. (518 aa)    
Predicted Functional Partners:
AEK23103.1
Hypothetical protein; P-loop containing nucleoside triphosphate hydrolases (SSF52540); T5orf172 (PF10544); DEAD-like helicase, N-terminal (SM00487).
   
 0.954
AEK23099.1
Hypothetical protein; N6 adenine-specific DNA methyltransferase, N12 class (PR00507); S-adenosyl-L-methionine-dependent methyltransferases (SSF53335); Protein involved in nucleic acid binding, methyltransferase activity and methylation.
 
   
 0.925
AEK23101.1
Hypothetical protein.
       0.548
AEK23151.1
Protein of unknown function DUF179 (PF02622).
   
    0.485
AEK24390.1
Transcriptional regulator nadR; Undefined Gene3D domain (G3DSA:3.40.50.300); P-loop containing nucleoside triphosphate hydrolases (SSF52540).
   
    0.479
AEK24391.1
Hypothetical protein.
   
    0.479
AEK23098.1
Hypothetical protein.
       0.443
AEK24206.1
Uncharacterized HTH-type transcriptional regulator yhcF; HTH transcriptional regulator, GntR (PS50949); SUBGROUP I AMINOTRANSFERASE RELATED (PTHR11751); HTH transcriptional regulator, GntR (SM00345); TRANSCRIPTION REGULATOR AMINOTRANSFERASE GNTR-RELATED (PTHR11751:SF1); Winged helix DNA-binding domain (SSF46785); HTH transcriptional regulator, GntR (PF00392); Winged helix-turn-helix transcription repressor DNA-binding (G3DSA:1.10.10.10); Protein involved in transcription factor activity and regulation of transcription, DNA-dependent.
   
    0.403
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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