STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK23583.1ABC transporter permease protein; N-terminus: SpI(SignalPHMM); 4 transmembrane domains; Protein of unknown function DUF214, permase predicted (PF02687). (385 aa)    
Predicted Functional Partners:
lolD
Lipoprotein-releasing system ATP-binding protein lolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 0.960
AEK23988.1
Lipoprotein-releasing system transmembrane protein lolC; N-terminus: SpI(SignalPHMM); 4 transmembrane domains; Protein of unknown function DUF214, permase predicted (PF02687).
  
  
 
0.929
macB
Uncharacterized ABC transporter ATP-binding protein yknY; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.784
AEK23025.1
Outer membrane protein omp85; Surface exposed; N-terminus: SpI(LipoP); Flags: Precursor; Surface antigen variable number (PF07244); Bacterial surface antigen (D15) (PF01103); Outer membrane assembly protein, YaeT (PIRSF006076); Outer membrane assembly protein, YaeT (TIGR03303).
 
   
 0.743
AEK23584.1
Conserved hypothetical protein; N-terminus: SpII(LipoP); AltName: Full=ORF2;Flags: Precursor; Uncharacterised conserved protein UCP016719 (PIRSF016719); Uncharacterised conserved protein UCP016719 (PF07075).
       0.699
AEK23765.1
Conserved hypothetical protein; N-terminus: SpI(LipoP); Outer membrane lipoprotein carrier protein LolA (PF03548); Lipoprotein localization factors LolAB (SSF89392); Protein involved in protein transport.
 
 
 
 0.693
AEK23833.1
Leader peptidase I; N-terminus: TMH(LipoP); Short=SPase I;AltName: Full=Leader peptidase I; 6 transmembrane domains; Peptidase S24/S26A/S26B/S26C (SSF51306); Peptidase S26A, signal peptidase I (PR00727); SIGNAL PEPTIDASE I (PTHR12383:SF1); Peptidase S24/S26A/S26B, conserved region (PF00717); Peptidase S26A, signal peptidase I (TIGR02227); PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED (PTHR12383); Peptidase S26A, signal peptidase I, conserved site (PS00761); Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (G3DSA:2.10.109.10); Protein involved in serine-type peptidas [...]
  
  
 0.579
AEK22751.1
70 kDa antigen; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
 
     0.560
AEK23585.1
Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.527
AEK23072.1
Conserved hypothetical protein; Undefined BlastProDom domain (PD936484); Protein of unknown function DUF164 (PF02591).
  
     0.525
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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