STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK23660.1Conserved hypothetical protein; Transcription regulator LuxR, C-terminal (PS00622); Protein involved in transcription factor activity, sequence-specific DNA binding and regulation of transcription, DNA-dependent. (341 aa)    
Predicted Functional Partners:
AEK23657.1
Lipopolysaccharide core biosynthesis protein rfaS.
 
    
0.831
AEK23656.1
Conserved hypothetical protein.
 
    
0.814
AEK23655.1
Lipopolysaccharide core biosynthesis glycosyltransferase waaE; 1 transmembrane domain; Undefined Gene3D domain (G3DSA:3.90.550.10); GLYCOSYLTRANSFERASE (PTHR22916); Nucleotide-diphospho-sugar transferases (SSF53448); Glycosyl transferase, family 2 (PF00535).
 
    0.788
AEK23658.1
UDP-Glycosyltransferase/glycogen phosphorylase (SSF53756); Glycosyl transferase, group 1 (PF00534); GLYCOSYLTRANSFERASE (PTHR12526); Protein involved in biosynthetic process.
  
    0.786
AEK23659.1
O-Antigen Polymerase family protein; N-terminus: TMH(LipoP); 14 transmembrane domains.
  
    0.783
AEK23604.1
Hypothetical protein; Weak similarity to UniProt:Q02729; N-terminus: TMH(LipoP); 13 transmembrane domains; Tetratricopeptide-like helical (G3DSA:1.25.40.10); TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (PTHR23083); O-antigen ligase-related (PF04932); TPR-like (SSF48452); Tetratricopeptide repeat-containing (PS50293); Tetratricopeptide (SM00028); Protein involved in binding.
 
    0.750
AEK23369.1
Hypothetical protein; Weak similarity to UniProt:C0SPA7; P-loop containing nucleoside triphosphate hydrolases (SSF52540); Cell divisionFtsK/SpoIIIE (PS50901); SPORULATION PROTEIN RELATED (PTHR22683); Tubulin, conserved site (PS00227); DNA TRANSLOCASE FTSK (PTHR22683:SF1); Cell divisionFtsK/SpoIIIE (PF01580); Protein involved in nucleotide binding, DNA binding, ATP binding, GTP binding, cell cycle, chromosome segregation, cell division and microtubule-based process.
  
     0.749
AEK23053.1
Winged helix DNA-binding domain (SSF46785); Winged helix-turn-helix transcription repressor DNA-binding (G3DSA:1.10.10.10).
  
     0.717
AEK24216.1
Hypothetical protein; Weak similarity to UniProt:P50730; 7 transmembrane domains; Abortive infection protein (PF02517).
  
     0.717
AEK24237.1
Protein severase; N-terminus: TMH(LipoP); AltName: Full=Prenyl protein-specific endoprotease 2;AltName: Full=Farnesylated proteins-converting enzyme 2;Short=FACE-2;AltName: Full=Protein severas; 5 transmembrane domains; Abortive infection protein (PF02517).
  
     0.709
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.