STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK23719.1Conserved hypothetical protein; N-terminus: TMH(LipoP); 4 transmembrane domains. (136 aa)    
Predicted Functional Partners:
AEK22832.1
Conserved hypothetical protein; N-terminus: SpI(LipoP); 1 transmembrane domain.
  
     0.634
AEK23979.1
Riboflavin synthase subunit alpha; Protein of unknown function DUF177 (PF02620).
  
     0.589
prmC
tRNA(m7G46)-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.570
AEK23732.1
Smr domain protein-possibly involved in DNA repair.
  
     0.522
AEK23215.1
Conserved hypothetical protein; Helix-turn-helix type 3 (PS50943); Lambda repressor-like, DNA-binding (SSF47413); Helix-turn-helix type 3 (SM00530); Helix-turn-helix type 3 (PF01381); Protein involved in sequence-specific DNA binding and DNA binding.
  
     0.512
AEK23059.1
Conserved hypothetical protein; RNA polymerase Rpb6 (PF01192); Protein involved in DNA binding, DNA-directed RNA polymerase activity and transcription, DNA-dependent.
 
     0.510
AEK22810.1
Hypothetical protein; N-terminus: SpI(LipoP); 1 transmembrane domain.
  
     0.482
AEK22730.1
Conserved hypothetical protein; N-terminus: SpI(LipoP); 1 transmembrane domain.
  
     0.474
AEK22729.1
Conserved hypothetical protein; N-terminus: SpI(LipoP).
  
     0.456
AEK23200.1
Conserved hypothetical protein; N-terminus: SpI(SignalPHMM); 1 transmembrane domain.
  
     0.455
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.