STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK23780.1Competence protein comM; N-terminus: SpI(SignalPHMM); Mg chelatase-related protein (TIGR00368); P-loop containing nucleoside triphosphate hydrolases (SSF52540); Undefined Gene3D domain (G3DSA:3.40.50.300); Ribosomal protein S5 domain 2-type fold (SSF54211); HSL AND CLP PROTEASE (PTHR11262); ATPase, AAA+ type, core (SM00382); DNA-dependent ATPase MCM (PR01657); Clp protease, ATP-binding subunit ClpX (PTHR11262:SF4); Magnesium chelatase, ChlI subunit (PF01078); Protein involved in nucleotide binding, nucleoside-triphosphatase activity, magnesium chelatase activity, DNA binding, ATP bindi [...] (511 aa)    
Predicted Functional Partners:
AEK22268.1
Protein smf; RuvA domain 2-like (SSF47781); DNA recombination-mediator protein A (PF02481); DNA recombination-mediator protein A (TIGR00732); Putative lysine decarboxylase (SSF102405); Protein involved in DNA mediated transformation.
 
 0.832
AEK23954.1
Protein COM101A; N-terminus: SpII(ProfileScan); AltName: Full=DNA transformation protein comF;AltName: Full=Protein COM101A; PRTase-like (SSF53271); Phosphoribosyltransferase (PF00156); Protein involved in nucleoside metabolic process.
 
  
 0.795
AEK23250.1
ComE operon protein 3; N-terminus: TMH(LipoP); 12 transmembrane domains; ComEC/Rec2-related protein (PF03772); ComEC/Rec2-related protein (TIGR00360).
 
  
 0.790
AEK23784.1
Protein of unknown function DUF2851 (PF11013).
 
     0.734
AEK23781.1
Short=DHPS;AltName: Full=Dihydropteroate pyrophosphorylase; Dihydropteroate synthase, DHPS (PS50972); Ribosome-binding factor A, conserved site (PS01319); Dihydropteroate synthase (PTHR20941:SF1); Dihydropteroate synthase, DHPS (PF00809); Dihydropteroate synthase-like (SSF51717); Dihydropteroate synthase, DHPS (G3DSA:3.20.20.20); Dihydropteroate synthase, DHPS (PS00793); Dihydropteroate synthase (TIGR01496); FOLATE SYNTHESIS PROTEINS (PTHR20941); Protein involved in dihydropteroate synthase activity, folic acid and derivative biosynthetic process, rRNA processing and cellular metabolic [...]
       0.730
AEK23782.1
Conserved hypothetical protein; N-terminus: SpII(LipoP).
       0.718
dacA
Uncharacterized protein ybbP; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.705
AEK23785.1
Conserved hypothetical protein.
       0.604
AEK24359.1
Uncharacterised protein family UPF0102 (PF02021); Restriction endonuclease, type II-like, core (SSF52980); Uncharacterised protein family UPF0102 (MF_00048); Protein involved in DNA binding; Belongs to the UPF0102 family.
 
  
 0.598
AEK23786.1
Oxygen-insensitive NAD(P)H nitroreductase; NADPH NITROREDUCTASE (PTHR23026); Nitroreductase-like (PF00881); NADPH NITROREDUCTASE (PTHR23026:SF43); Undefined Gene3D domain (G3DSA:3.40.109.10); Nitroreductase-like (SSF55469); Protein involved in oxidoreductase activity.
       0.577
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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