STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK24084.1Hypothetical protein. (39 aa)    
Predicted Functional Partners:
AEK24082.1
Conserved hypothetical protein.
       0.513
AEK24083.1
Uridine phosphorylase; Short=UrdPase;Short=UPase; Purine and uridine phosphorylases (SSF53167); Undefined Gene3D domain (G3DSA:3.40.50.1580); Nucleoside phosphorylase (PF01048); Nucleoside phosphorylase, family 1 (PTHR21234); PURINE NUCLEOSIDE PHOSPHORYLASE (PTHR21234:SF7); Protein involved in catalytic activity and nucleoside metabolic process.
       0.513
AEK24081.1
Thiamine biosynthesis lipoprotein apbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.478
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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