STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK24130.1FAD diphosphatase; Locus: Belongs to PUL_11; Short=AtNUDT23;AltName: Full=ADP-ribose pyrophosphatase;AltName: Full=FAD diphosphatase;Flags: Precursor; MUTT/NUDIX HYDROLASE (PTHR22769); NUDIX hydrolase, conserved site (PS00893); NUDIX hydrolase (PR00502); NUDIX hydrolase domain-like (SSF55811); NUDIX hydrolase domain (G3DSA:3.90.79.10); NUDIX hydrolase domain (PF00293); Protein involved in hydrolase activity. (171 aa)    
Predicted Functional Partners:
AEK24131.1
Conserved hypothetical protein; N-terminus: SpI(LipoP); Locus: Belongs to PUL_11; 2 transmembrane domains; Peptidase M14, carboxypeptidase A (PS00133); Protein involved in metallocarboxypeptidase activity, zinc ion binding and proteolysis.
       0.773
AEK24132.1
Conserved hypothetical protein; Locus: Belongs to PUL_11; 22 transmembrane domains; Protein of unknown function DUF2339, transmembrane (PF10101).
       0.737
AEK24133.1
Uncharacterized protein yhaZ; DNA alkylation repair enzyme (PF08713).
       0.483
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.403
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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