STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK24282.1Short=PBP-2; Penicillin-binding protein, transpeptidase (PF00905); Penicillin-binding protein, dimerisation domain (PF03717); Undefined Gene3D domain (G3DSA:3.40.710.10); Beta-lactamase-type transpeptidase fold (SSF56601); Penicillin-binding protein, dimerisation domain (SSF56519); Protein involved in penicillin binding and peptidoglycan-based cell wall biogenesis. (597 aa)    
Predicted Functional Partners:
AEK24281.1
Rod shape-determining protein rodA; N-terminus: TMH(LipoP); 10 transmembrane domains; Cell cycle protein (PF01098); Protein involved in cell cycle; Belongs to the SEDS family.
 
 0.986
AEK24285.1
Cell shape determining protein MreB/Mrl (PR01652); Cell shape determining protein MreB/Mrl (PF06723); Actin-like ATPase domain (SSF53067); Undefined Gene3D domain (G3DSA:3.30.420.40); Cell shape determining protein MreB/Mrl (TIGR00904); Protein involved in cell morphogenesis.
 
 
 0.934
AEK24213.1
N-terminus: SpI(SignalPHMM); AltName: Full=Sporulation-specific penicillin-binding protein; 1 transmembrane domain; Penicillin-binding protein, transpeptidase (PF00905); Penicillin-binding protein 2x (pbp-2x), c-terminal domain (SSF54184); Penicillin-binding protein, dimerisation domain (PF03717); PASTA (PS51178); Undefined Gene3D domain (G3DSA:3.40.710.10); PASTA (PF03793); Beta-lactamase-type transpeptidase fold (SSF56601); Penicillin-binding protein, dimerisation domain (SSF56519); Protein involved in penicillin binding and peptidoglycan-based cell wall biogenesis.
  
  
 
0.927
AEK24284.1
Rod shape-determining protein mreC; Involved in formation and maintenance of cell shape.
 
 
 0.905
AEK24242.1
Stage V sporulation protein E; N-terminus: TMH(LipoP); 8 transmembrane domains; Cell cycle protein (PF01098); Protein involved in cell cycle; Belongs to the SEDS family.
 
 
 0.829
AEK22230.1
DD-transpeptidase; N-terminus: TMH(LipoP); Short=PBP-1a;Short=PBP1a;Includes:RecName: Full=Penicillin-insensitive transglycosylase;AltName: Full=Peptidoglycan TGase;Includes:RecName: Full=Penicillin-sensitive transpeptidase;AltName: Full=DD-transpeptidase; 1 transmembrane domain; Penicillin-binding protein, transpeptidase (PF00905); Glycosyl transferase, family 51 (PF00912); Beta-lactamase-type transpeptidase fold (SSF56601); Undefined Gene3D domain (G3DSA:3.40.710.10); Protein involved in catalytic activity, penicillin binding, peptidoglycan biosynthetic process and peptidoglycan-base [...]
  
 
 0.817
AEK24283.1
Conserved hypothetical protein; N-terminus: TMH(LipoP); 5 transmembrane domains.
 
     0.762
AEK23694.1
Regulatory protein dniR; N-terminus: SpI(LipoP); EC=4.2.2.n1;AltName: Full=Murein hydrolase D;AltName: Full=Regulatory protein dniR;Flags: Precursor; Undefined Gene3D domain (G3DSA:3.10.350.10); Prokaryotic transglycosylase, active site (PS00922); Undefined Gene3D domain (G3DSA:1.10.530.10); LYTIC TRANSGLYCOSYLASE (PTHR21666:SF10); PEPTIDASE-RELATED (PTHR21666); Peptidoglycan-binding Lysin subgroup (SM00257); Peptidoglycan-binding lysin domain (PF01476); Lysozyme-like (SSF53955); LysM domain (SSF54106); Lytic transglycosylase-like, catalytic (PF01464); Protein involved in cell wall mac [...]
 
 
 0.704
AEK24247.1
Cell division protein FtsQ; N-terminus: SpI(LipoP); 1 transmembrane domain.
 
 
 0.701
murE
UDP-MurNAc-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
  
 0.611
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.