STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK24360.1Putative exodeoxyribonuclease V; Weak similarity to UniProt:Q033I1; Undefined Gene3D domain (G3DSA:3.40.50.300); P-loop containing nucleoside triphosphate hydrolases (SSF52540); DNA helicase, UvrD-like, C-terminal (PS51217); Helicase, superfamily 1, UvrD-related (PS51198); DNA helicase, UvrD/REP type (PF00580); DNA helicase, UvrD/REP type (PTHR11070); Protein involved in DNA binding, ATP-dependent DNA helicase activity, ATP binding, hydrolase activity and DNA repair. (1056 aa)    
Predicted Functional Partners:
AEK24280.1
Hypothetical protein; Weak similarity to UniProt:Q8E5U0.
 
 
 0.994
AEK24359.1
Uncharacterised protein family UPF0102 (PF02021); Restriction endonuclease, type II-like, core (SSF52980); Uncharacterised protein family UPF0102 (MF_00048); Protein involved in DNA binding; Belongs to the UPF0102 family.
       0.773
AEK22445.1
Hypothetical protein; P-loop containing nucleoside triphosphate hydrolases (SSF52540); DUF889 (PF05970).
 
 
 0.645
AEK23331.1
Hypothetical protein; Weak similarity to UniProt:Q8JHV6; Protein of unknown function DUF349 (PF03993).
  
     0.595
AEK24358.1
tvaII; N-terminus: SpII(LipoP); AltName: Full=Alpha-amylase II;AltName: Full=TVA II; 1 transmembrane domain; Glycosyl hydrolase, family 13, catalytic domain (PF00128); Alpha-amylase, C-terminal all beta (PF02806); Glycoside hydrolase, subgroup, catalytic core (G3DSA:3.20.20.80); AMYLASE (PTHR10357); ALPHA-AMYLASE (PTHR10357:SF11); Glycoside hydrolase, catalytic core (SSF51445); Protein involved in catalytic activity, cation binding and carbohydrate metabolic process.
     
 0.581
AEK23156.1
DNA polymerase III subunit alpha; Polymerase/histidinol phosphatase-like (SSF89550); DNA (TIGR00594); Polynucleotidyl transferase, ribonuclease H fold (SSF53098); Exonuclease, RNase T/DNA polymerase III (PF00929); PHP, C-terminal (PF02811); Polymerase/histidinol phosphatase, N-terminal (SM00481); Bacterial DNA polymerase III, alpha subunit (PF07733); Nucleic acid-binding, OB-fold-like (SSF50249); Undefined Gene3D domain (G3DSA:3.30.420.10); Protein involved in DNA binding, DNA-directed DNA polymerase activity, 3'-5' exonuclease activity, nucleic acid binding, catalytic activity and DNA [...]
  
  
 0.571
AEK22551.1
Hypothetical protein; Weak similarity to UniProt:C9MSL4.
  
 
 0.557
AEK23385.1
Relaxase/mobilization nuclease family protein; Endonuclease relaxase, MobA/VirD2 (PF03432).
  
 
 0.557
AEK23939.1
AltName: Full=PIF1/RRM3 DNA helicase-like protein; P-loop containing nucleoside triphosphate hydrolases (SSF52540); DUF889 (PF05970); ATPase, AAA+ type, core (SM00382); DNA HELICASE-RELATED (PTHR23274); Protein involved in nucleotide binding and nucleoside-triphosphatase activity.
  
 
 0.557
AEK22264.1
Conserved hypothetical protein; Tetratricopeptide repeat (PS50005).
  
     0.548
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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