STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK24386.1Homeodomain-like (SSF46689); Insertion element protein (PF03811); Protein involved in transposition, DNA-mediated. (138 aa)    
Predicted Functional Partners:
AEK24299.1
N-terminus: SpI(SignalPHMM); Transposase, IS1 (PF03400); Protein involved in DNA binding, transposase activity and transposition, DNA-mediated.
  
    0.707
AEK23257.1
Transposase, IS1 (PF03400); Insertion element protein (PF03811); Protein involved in DNA binding, transposase activity and transposition, DNA-mediated.
  
     0.693
AEK24382.1
Transposase, IS1 (PF03400); Insertion element protein (PF03811); Protein involved in DNA binding, transposase activity and transposition, DNA-mediated.
 
    0.668
AEK23384.1
Transposase, IS1 (PF03400); Insertion element protein (PF03811); Protein involved in DNA binding, transposase activity and transposition, DNA-mediated.
  
    0.614
AEK23394.1
Transposase, IS1 (PF03400); Insertion element protein (PF03811); Protein involved in DNA binding, transposase activity and transposition, DNA-mediated.
  
    0.610
AEK22945.1
Transposase, IS1 (PF03400); Insertion element protein (PF03811); Protein involved in DNA binding, transposase activity and transposition, DNA-mediated.
  
    0.608
AEK23347.1
Transposase, IS1 (PF03400); Insertion element protein (PF03811); Protein involved in DNA binding, transposase activity and transposition, DNA-mediated.
  
    0.608
AEK23483.1
Transposase, IS1 (PF03400); Insertion element protein (PF03811); Protein involved in DNA binding, transposase activity and transposition, DNA-mediated.
  
    0.608
AEK23260.1
Insertion element protein (PF03811); Protein involved in transposition, DNA-mediated.
  
     0.606
AEK23418.1
Conserved hypothetical protein.
  
     0.570
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.