STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK24388.1Conserved hypothetical protein; Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative (SSF89957). (86 aa)    
Predicted Functional Partners:
AEK24390.1
Transcriptional regulator nadR; Undefined Gene3D domain (G3DSA:3.40.50.300); P-loop containing nucleoside triphosphate hydrolases (SSF52540).
 
     0.892
AEK24389.1
Nicotinamide riboside transporter pnuC; N-terminus: TMH(LipoP); 7 transmembrane domains; Nicotinamide mononucleotide transporter PnuC (PF04973); Nicotinamide mononucleotide transporter PnuC (TIGR01528); Protein involved in transport.
 
     0.881
AEK24391.1
Hypothetical protein.
       0.846
AEK24387.1
Hypothetical protein; N-terminus: TMH(LipoP); 1 transmembrane domain.
       0.496
AEK23908.1
Conserved hypothetical protein; N-terminus: TMH(LipoP); 2 transmembrane domains.
  
     0.442
AEK22777.1
Conserved hypothetical protein; N-terminus: SpII(LipoP).
  
     0.439
AEK22888.1
N-terminus: TMH(LipoP); 12 transmembrane domains; Protein of unknown function DUF819 (PF05684).
  
     0.434
AEK22628.1
Conserved hypothetical protein; N-terminus: SpI(LipoP); 1 transmembrane domain.
  
     0.427
AEK23808.1
Conserved hypothetical protein; N-terminus: SpI(SignalPHMM); 1 transmembrane domain; Protein secE/sec61-gamma protein (PF00584); SecE subunit of protein translocation complex (TIGR00964); Protein involved in P-P-bond-hydrolysis-driven protein transmembrane transporter activity, protein targeting, intracellular protein transport and protein secretion; Belongs to the SecE/SEC61-gamma family.
  
     0.404
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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