STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK24505.1Conserved hypothetical protein. (156 aa)    
Predicted Functional Partners:
AEK24504.1
Conserved hypothetical protein.
       0.773
AEK24502.1
Conserved hypothetical protein.
       0.762
AEK24503.1
Conserved hypothetical protein.
       0.762
AEK24501.1
Hypothetical protein; Weak similarity to UniProt:O31506.
       0.751
AEK24506.1
Conserved hypothetical protein.
       0.551
AEK24500.1
AltName: Full=Transposon TN4551; Integrase, catalytic core (PF00665); Integrase, catalytic core (PS50994); Polynucleotidyl transferase, ribonuclease H fold (SSF53098); Undefined Gene3D domain (G3DSA:3.30.420.10); Protein involved in DNA binding, nucleic acid binding and DNA integration.
       0.540
AEK24507.1
Hypothetical protein.
       0.537
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.