STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALG06747.1Glycosyl transferase family 4; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)    
Predicted Functional Partners:
ALG14606.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.942
ALG06748.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.941
ALG06744.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.903
ALG06745.1
Nucleoside-diphosphate-sugar pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.874
ALG06746.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ALG10717.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.745
ALG06742.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.566
ALG09316.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.561
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.551
ALG08095.1
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.536
Your Current Organism:
Kibdelosporangium phytohabitans
NCBI taxonomy Id: 860235
Other names: CCTCC AA 2010001, K. phytohabitans, KCTC 19775, Kibdelosporangium phytohabitans Xing et al. 2012
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.