Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALG05528.1 | ALG05803.1 | AOZ06_00005 | AOZ06_01685 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| ALG05528.1 | ALG10043.1 | AOZ06_00005 | AOZ06_26910 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.879 |
| ALG05528.1 | ALG11167.1 | AOZ06_00005 | AOZ06_33630 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
| ALG05528.1 | ALG11666.1 | AOZ06_00005 | AOZ06_36630 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.477 |
| ALG05528.1 | dnaA | AOZ06_00005 | AOZ06_52935 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.982 |
| ALG05528.1 | recF | AOZ06_00005 | AOZ06_00015 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.954 |
| ALG05803.1 | ALG05528.1 | AOZ06_01685 | AOZ06_00005 | DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.920 |
| ALG05803.1 | ALG10043.1 | AOZ06_01685 | AOZ06_26910 | DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.879 |
| ALG05803.1 | ALG11167.1 | AOZ06_01685 | AOZ06_33630 | DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
| ALG05803.1 | ALG11666.1 | AOZ06_01685 | AOZ06_36630 | DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.477 |
| ALG05803.1 | dnaA | AOZ06_01685 | AOZ06_52935 | DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.974 |
| ALG05803.1 | recF | AOZ06_01685 | AOZ06_00015 | DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.842 |
| ALG06737.1 | ALG11666.1 | AOZ06_07165 | AOZ06_36630 | DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.520 |
| ALG10043.1 | ALG05528.1 | AOZ06_26910 | AOZ06_00005 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.879 |
| ALG10043.1 | ALG05803.1 | AOZ06_26910 | AOZ06_01685 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.879 |
| ALG10043.1 | ALG11666.1 | AOZ06_26910 | AOZ06_36630 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.415 |
| ALG10043.1 | recF | AOZ06_26910 | AOZ06_00015 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.618 |
| ALG11167.1 | ALG05528.1 | AOZ06_33630 | AOZ06_00005 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.449 |
| ALG11167.1 | ALG05803.1 | AOZ06_33630 | AOZ06_01685 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
| ALG11167.1 | ALG11666.1 | AOZ06_33630 | AOZ06_36630 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
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