STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALG12488.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family. (588 aa)    
Predicted Functional Partners:
ALG10938.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.980
ALG10753.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.979
ALG10934.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.979
ALG12164.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.974
ALG09202.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.972
ALG08297.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.967
ALG12161.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.964
ALG12159.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.956
ALG10690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.947
ALG06502.1
Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.938
Your Current Organism:
Kibdelosporangium phytohabitans
NCBI taxonomy Id: 860235
Other names: CCTCC AA 2010001, K. phytohabitans, KCTC 19775, Kibdelosporangium phytohabitans Xing et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.