STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALG12649.1Steroid C27-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (407 aa)    
Predicted Functional Partners:
ALG13797.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.905
ALG10953.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
ALG09579.1
Phthalate 4,5-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.809
ALG10690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.788
ALG09875.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.741
ALG11390.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.734
ALG12707.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.700
ALG12646.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.689
ALG12712.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.665
ALG09253.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.663
Your Current Organism:
Kibdelosporangium phytohabitans
NCBI taxonomy Id: 860235
Other names: CCTCC AA 2010001, K. phytohabitans, KCTC 19775, Kibdelosporangium phytohabitans Xing et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.