STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALG13733.1Protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (793 aa)    
Predicted Functional Partners:
ALG15347.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.713
ALG07042.1
Hypothetical protein; Extracellular zinc metalloprotease.
  
   
 0.636
ALG05782.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.505
ALG13734.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
ALG06566.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
ALG07852.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
ALG08906.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.419
ALG15203.1
Glycogen debranching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
ALG12112.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Kibdelosporangium phytohabitans
NCBI taxonomy Id: 860235
Other names: CCTCC AA 2010001, K. phytohabitans, KCTC 19775, Kibdelosporangium phytohabitans Xing et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.