STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK71270.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (737 aa)    
Predicted Functional Partners:
yeaC
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.962
AMK71269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.954
yeaB
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.645
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
  
    0.630
AMK73408.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
yqzC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.500
ysoA
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
yrrS
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.467
yuxL
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.437
yhjD
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
Your Current Organism:
Bacillus subtilis natto
NCBI taxonomy Id: 86029
Other names: B. subtilis subsp. natto, Bacillus subtilis subsp. natto, Bacillus subtilis var. natto
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.