STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spsIGlucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)    
Predicted Functional Partners:
spsJ
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
spsL
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.993
spsK
NAD(P)-dependent oxidoreductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.992
ytdA
UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.931
yhxB
Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.926
yngB
UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.926
gtaB
UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.926
spsC
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.888
spsF
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.873
spsG
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.871
Your Current Organism:
Bacillus subtilis natto
NCBI taxonomy Id: 86029
Other names: B. subtilis subsp. natto, Bacillus subtilis subsp. natto, Bacillus subtilis var. natto
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.