STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_11192Putative FHA domain protein SNIP1. (213 aa)    
Predicted Functional Partners:
cwf29
U2 snRNP component ist3.
   
 0.997
cwc26
Pre-mRNA-splicing factor cwc26.
   
 0.990
brr2
Pre-mRNA-splicing factor brr2.
   
 
 0.985
prp45
Pre-mRNA-processing protein 45.
    
 
 0.971
prp10
U2 snRNP component prp10.
    
 
 0.967
cwc22
Pre-mRNA-splicing factor cwc22.
   
 
 0.958
ini1
Pre-mRNA-splicing factor ini1.
    
 
 0.956
sap61
Pre-mRNA-splicing factor sap61.
   
 
 0.948
cwc24
Pre-mRNA-splicing factor cwc24.
   
 
 0.946
cwc27
Peptidyl-prolyl isomerase cwc27.
    
 0.944
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.