STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_00105Oxidoreductase, zinc-binding dehydrogenase family. (453 aa)    
Predicted Functional Partners:
tum1
Putative 3-mercaptopyruvate sulfurtransferase.
  
 
  0.733
SOX
Sulfite oxidase.
     
 0.711
SOX-2
Sulfite oxidase.
     
 0.630
SUOX
Sulfite oxidase.
     
 0.630
NIAD
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
     
 0.584
CLCR_06111
Uncharacterized protein.
    
  0.529
CLCR_02007
Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
    
  0.529
CLCR_02325
VOC domain-containing protein.
    
  0.529
wA
Conidial yellow pigment biosynthesis polyketide synthase.
    
  0.529
CLCR_04897
Type III polyketide synthase; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
    
  0.529
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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