Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_00105 | CLCR_02007 | A0A1C1C687 | A0A1C1CDN5 | Oxidoreductase, zinc-binding dehydrogenase family. | Alpha,alpha-trehalose-phosphate synthase (UDP-forming). | 0.529 |
CLCR_00105 | CLCR_02325 | A0A1C1C687 | A0A1C1CEN2 | Oxidoreductase, zinc-binding dehydrogenase family. | VOC domain-containing protein. | 0.529 |
CLCR_00105 | CLCR_04897 | A0A1C1C687 | A0A1C1CL43 | Oxidoreductase, zinc-binding dehydrogenase family. | Type III polyketide synthase; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. | 0.529 |
CLCR_00105 | CLCR_06111 | A0A1C1C687 | A0A1C1C9C7 | Oxidoreductase, zinc-binding dehydrogenase family. | Uncharacterized protein. | 0.529 |
CLCR_00105 | NIAD | A0A1C1C687 | A0A1C1CCF1 | Oxidoreductase, zinc-binding dehydrogenase family. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.584 |
CLCR_00105 | SOX | A0A1C1C687 | A0A1C1C9L3 | Oxidoreductase, zinc-binding dehydrogenase family. | Sulfite oxidase. | 0.711 |
CLCR_00105 | SOX-2 | A0A1C1C687 | A0A1C1CMI8 | Oxidoreductase, zinc-binding dehydrogenase family. | Sulfite oxidase. | 0.630 |
CLCR_00105 | SUOX | A0A1C1C687 | A0A1C1CTK3 | Oxidoreductase, zinc-binding dehydrogenase family. | Sulfite oxidase. | 0.630 |
CLCR_00105 | tum1 | A0A1C1C687 | A0A1C1CDP7 | Oxidoreductase, zinc-binding dehydrogenase family. | Putative 3-mercaptopyruvate sulfurtransferase. | 0.733 |
CLCR_00105 | wA | A0A1C1C687 | A0A1C1CHV5 | Oxidoreductase, zinc-binding dehydrogenase family. | Conidial yellow pigment biosynthesis polyketide synthase. | 0.529 |
CLCR_02007 | CLCR_00105 | A0A1C1CDN5 | A0A1C1C687 | Alpha,alpha-trehalose-phosphate synthase (UDP-forming). | Oxidoreductase, zinc-binding dehydrogenase family. | 0.529 |
CLCR_02325 | CLCR_00105 | A0A1C1CEN2 | A0A1C1C687 | VOC domain-containing protein. | Oxidoreductase, zinc-binding dehydrogenase family. | 0.529 |
CLCR_04897 | CLCR_00105 | A0A1C1CL43 | A0A1C1C687 | Type III polyketide synthase; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. | Oxidoreductase, zinc-binding dehydrogenase family. | 0.529 |
CLCR_06111 | CLCR_00105 | A0A1C1C9C7 | A0A1C1C687 | Uncharacterized protein. | Oxidoreductase, zinc-binding dehydrogenase family. | 0.529 |
NIAD | CLCR_00105 | A0A1C1CCF1 | A0A1C1C687 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Oxidoreductase, zinc-binding dehydrogenase family. | 0.584 |
NIAD | SOX | A0A1C1CCF1 | A0A1C1C9L3 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Sulfite oxidase. | 0.899 |
NIAD | SOX-2 | A0A1C1CCF1 | A0A1C1CMI8 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Sulfite oxidase. | 0.904 |
NIAD | SUOX | A0A1C1CCF1 | A0A1C1CTK3 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Sulfite oxidase. | 0.899 |
NIAD | tum1 | A0A1C1CCF1 | A0A1C1CDP7 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Putative 3-mercaptopyruvate sulfurtransferase. | 0.906 |
SOX | CLCR_00105 | A0A1C1C9L3 | A0A1C1C687 | Sulfite oxidase. | Oxidoreductase, zinc-binding dehydrogenase family. | 0.711 |
page 1 of 2