STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
naa30N-alpha-acetyltransferase 30. (232 aa)    
Predicted Functional Partners:
CLCR_01430
Putative amino-acid N-acetyltransferase subunit Mak10.
   
 0.996
CLCR_02134
Uncharacterized protein.
    
 0.963
CLCR_00996
LSM domain-containing protein 1-B.
    
 0.963
SmE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.829
smb1
Small nuclear ribonucleoprotein-associated protein B.
    
  0.662
CLCR_07474
N-acetyltransferase domain-containing protein.
   
  
 0.575
Got2
Aspartate aminotransferase.
     
 0.568
ARG1
Argininosuccinate synthase.
   
 
  0.564
aat2
Aspartate aminotransferase.
   
 
  0.561
CLCR_07473
ADP-ribosylation factor family protein.
     
 0.546
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.