Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_00677 | CLCR_01423 | A0A1C1C6Z8 | A0A1C1CB07 | Uncharacterized protein. | Pumilio-family RNA binding repeat protein. | 0.420 |
CLCR_00677 | CLCR_01960 | A0A1C1C6Z8 | A0A1C1CDJ6 | Uncharacterized protein. | 5-Methylcytosine G/T mismatch-specific DNA glycosylase. | 0.589 |
CLCR_00677 | CLCR_02749 | A0A1C1C6Z8 | A0A1C1D335 | Uncharacterized protein. | PUM-HD domain-containing protein. | 0.420 |
CLCR_00677 | CLCR_03331 | A0A1C1C6Z8 | A0A1C1CGS4 | Uncharacterized protein. | R3H and G-patch domain-containing protein. | 0.509 |
CLCR_00677 | CLCR_07243 | A0A1C1C6Z8 | A0A1C1CNN2 | Uncharacterized protein. | Peptide-methionine (S)-S-oxide reductase. | 0.493 |
CLCR_00677 | CLCR_07929 | A0A1C1C6Z8 | A0A1C1CU30 | Uncharacterized protein. | Putative PAB1 binding protein (Pbp1). | 0.424 |
CLCR_00677 | CLCR_09848 | A0A1C1C6Z8 | A0A1C1CZ76 | Uncharacterized protein. | Putative G-patch domain protein. | 0.509 |
CLCR_00677 | CLCR_10742 | A0A1C1C6Z8 | A0A1C1CWL3 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.482 |
CLCR_00677 | CLCR_10872 | A0A1C1C6Z8 | A0A1C1CZ78 | Uncharacterized protein. | Uncharacterized protein. | 0.509 |
CLCR_01423 | CLCR_00677 | A0A1C1CB07 | A0A1C1C6Z8 | Pumilio-family RNA binding repeat protein. | Uncharacterized protein. | 0.420 |
CLCR_01960 | CLCR_00677 | A0A1C1CDJ6 | A0A1C1C6Z8 | 5-Methylcytosine G/T mismatch-specific DNA glycosylase. | Uncharacterized protein. | 0.589 |
CLCR_02749 | CLCR_00677 | A0A1C1D335 | A0A1C1C6Z8 | PUM-HD domain-containing protein. | Uncharacterized protein. | 0.420 |
CLCR_03331 | CLCR_00677 | A0A1C1CGS4 | A0A1C1C6Z8 | R3H and G-patch domain-containing protein. | Uncharacterized protein. | 0.509 |
CLCR_07243 | CLCR_00677 | A0A1C1CNN2 | A0A1C1C6Z8 | Peptide-methionine (S)-S-oxide reductase. | Uncharacterized protein. | 0.493 |
CLCR_07929 | CLCR_00677 | A0A1C1CU30 | A0A1C1C6Z8 | Putative PAB1 binding protein (Pbp1). | Uncharacterized protein. | 0.424 |
CLCR_09848 | CLCR_00677 | A0A1C1CZ76 | A0A1C1C6Z8 | Putative G-patch domain protein. | Uncharacterized protein. | 0.509 |
CLCR_09848 | CLCR_10872 | A0A1C1CZ76 | A0A1C1CZ78 | Putative G-patch domain protein. | Uncharacterized protein. | 0.826 |
CLCR_10742 | CLCR_00677 | A0A1C1CWL3 | A0A1C1C6Z8 | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | Uncharacterized protein. | 0.482 |
CLCR_10872 | CLCR_00677 | A0A1C1CZ78 | A0A1C1C6Z8 | Uncharacterized protein. | Uncharacterized protein. | 0.509 |
CLCR_10872 | CLCR_09848 | A0A1C1CZ78 | A0A1C1CZ76 | Uncharacterized protein. | Putative G-patch domain protein. | 0.826 |