STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_05436DDHD domain protein. (941 aa)    
Predicted Functional Partners:
CLCR_05389
WD repeat protein.
 
    
 0.870
SEC23
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.809
sec31
Protein transport protein sec31.
    
 0.800
CLCR_06030
Uncharacterized protein.
   
 0.781
SEC13
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.769
Gstk1
Glutathione S-transferase kappa.
 
  
   0.743
sec24
Protein transport protein sec24.
     
 0.730
sec22
Protein transport protein sec22; Belongs to the synaptobrevin family.
     
 0.709
CLCR_06614
Uncharacterized protein.
   
 
 0.678
BOS1
Protein transport protein BOS1.
   
 
  0.648
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.