Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_00288 | CLCR_00315 | A0A1C1D059 | A0A1C1D0D2 | Putative RNA polymerase I specific transcription initiation factor Rrn7. | Uncharacterized protein. | 0.899 |
CLCR_00288 | CLCR_05632 | A0A1C1D059 | A0A1C1C7M3 | Putative RNA polymerase I specific transcription initiation factor Rrn7. | Plasma membrane G-protein coupled receptor. | 0.800 |
CLCR_00288 | CLCR_06167 | A0A1C1D059 | A0A1C1CA36 | Putative RNA polymerase I specific transcription initiation factor Rrn7. | Ubiquitin-like domain-containing protein. | 0.912 |
CLCR_00288 | CLCR_08814 | A0A1C1D059 | A0A1C1CUC4 | Putative RNA polymerase I specific transcription initiation factor Rrn7. | BZIP domain-containing protein. | 0.962 |
CLCR_00288 | CLCR_10902 | A0A1C1D059 | A0A1C1CWR2 | Putative RNA polymerase I specific transcription initiation factor Rrn7. | Ubiquitin-40S ribosomal protein S27a. | 0.975 |
CLCR_00288 | UBI4 | A0A1C1D059 | A0A1C1CKG7 | Putative RNA polymerase I specific transcription initiation factor Rrn7. | Polyubiquitin. | 0.962 |
CLCR_00288 | rpn11 | A0A1C1D059 | A0A1C1C704 | Putative RNA polymerase I specific transcription initiation factor Rrn7. | 26S proteasome regulatory subunit rpn11. | 0.896 |
CLCR_00288 | ubi2 | A0A1C1D059 | A0A1C1CZ23 | Putative RNA polymerase I specific transcription initiation factor Rrn7. | Ubiquitin-60S ribosomal protein L40. | 0.585 |
CLCR_00315 | CLCR_00288 | A0A1C1D0D2 | A0A1C1D059 | Uncharacterized protein. | Putative RNA polymerase I specific transcription initiation factor Rrn7. | 0.899 |
CLCR_00315 | CLCR_05632 | A0A1C1D0D2 | A0A1C1C7M3 | Uncharacterized protein. | Plasma membrane G-protein coupled receptor. | 0.800 |
CLCR_00315 | CLCR_06167 | A0A1C1D0D2 | A0A1C1CA36 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.912 |
CLCR_00315 | CLCR_08814 | A0A1C1D0D2 | A0A1C1CUC4 | Uncharacterized protein. | BZIP domain-containing protein. | 0.962 |
CLCR_00315 | CLCR_10902 | A0A1C1D0D2 | A0A1C1CWR2 | Uncharacterized protein. | Ubiquitin-40S ribosomal protein S27a. | 0.963 |
CLCR_00315 | UBI4 | A0A1C1D0D2 | A0A1C1CKG7 | Uncharacterized protein. | Polyubiquitin. | 0.959 |
CLCR_00315 | rpn11 | A0A1C1D0D2 | A0A1C1C704 | Uncharacterized protein. | 26S proteasome regulatory subunit rpn11. | 0.896 |
CLCR_04354 | CLCR_05632 | A0A1C1CJ65 | A0A1C1C7M3 | Putative Polyubiquitin. | Plasma membrane G-protein coupled receptor. | 0.800 |
CLCR_04354 | CLCR_06167 | A0A1C1CJ65 | A0A1C1CA36 | Putative Polyubiquitin. | Ubiquitin-like domain-containing protein. | 0.912 |
CLCR_04354 | CLCR_08814 | A0A1C1CJ65 | A0A1C1CUC4 | Putative Polyubiquitin. | BZIP domain-containing protein. | 0.958 |
CLCR_04354 | CLCR_10902 | A0A1C1CJ65 | A0A1C1CWR2 | Putative Polyubiquitin. | Ubiquitin-40S ribosomal protein S27a. | 0.958 |
CLCR_04354 | UBI4 | A0A1C1CJ65 | A0A1C1CKG7 | Putative Polyubiquitin. | Polyubiquitin. | 0.946 |
page 1 of 4