STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_05341DUF4045 domain-containing protein. (1708 aa)    
Predicted Functional Partners:
CLCR_10370
Uncharacterized protein.
    
 0.816
CLCR_02347
Dor1-like family protein.
    
 
 0.804
CLCR_09684
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 
 0.768
CLCR_02820
Actin associated protein Wsp1.
    
 
 0.760
CLCR_10372
Actin-like protein; Belongs to the actin family.
    
 
 0.753
acnA
Actin, gamma.
    
 
 0.753
CLCR_02780
Putative Golgi complex component Cog3.
    
 
 0.751
CLCR_01088
Cog4 domain-containing protein.
    
 
 0.724
ARL1
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
 
  
 
 0.664
CLCR_09181
GRIP domain-containing protein.
    
  0.612
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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