STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_05837Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein. (487 aa)    
Predicted Functional Partners:
SDH2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.957
CLCR_03674
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
   
 0.930
fgaOx3
Chanoclavine-I aldehyde reductase.
   
  0.904
CLCR_04816
NADH-ubiquinone oxidoreductase; Belongs to the complex I 49 kDa subunit family.
   
 0.872
CLCR_10035
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
  
 0.867
CLCR_03666
NADH-ubiquinone oxidoreductase.
  
 0.851
CLCR_04058
Uncharacterized protein.
  
 0.842
sdh3
Succinate dehydrogenase cytochrome B subunit, mitochondrial.
  
 0.842
CLCR_11069
Uncharacterized protein.
  
 0.842
sdh3-2
Succinate dehydrogenase cytochrome B subunit, mitochondrial.
  
 0.842
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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