STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOD2Na(+)/H(+) antiporter 1. (1135 aa)    
Predicted Functional Partners:
CDC31
Cell division control protein 31.
   
 0.547
CLCR_06356
EF-hand domain-containing protein; Belongs to the calmodulin family.
   
 0.547
CLCR_06489
Calmodulin; Belongs to the calmodulin family.
   
 0.547
CETN1
Centrin-1.
   
 0.547
ncs1
Calcium-binding protein NCS-1.
   
 0.547
CLCR_05002
Putative calmodulin.
   
 0.547
CLCR_07688
DUF1348 domain protein.
   
 0.547
cdc4
Myosin regulatory light chain cdc4.
   
 0.547
CLCR_09999
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.547
CLCR_11423
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.547
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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