STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_06113Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
NIAD
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.792
CLCR_08983
Putative ribosomal protein subunit s18 protein.
    
  0.575
CLCR_03542
Mitochondrial 37S ribosomal protein MRP4.
   
  0.572
MRPS16
37S ribosomal protein S16, mitochondrial.
   
  0.572
CLCR_03031
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
    
  0.572
CLCR_02540
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.571
CLCR_00444
Putative mitochondrial ribosomal protein DAP3.
    
  0.570
CLCR_10235
37S ribosomal protein Rsm24.
    
  0.570
CLCR_10769
L51_S25_CI-B8 domain-containing protein.
    
  0.570
MRP2
37S ribosomal protein MRP2, mitochondrial.
    
  0.570
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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