Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG8 | CLCR_05264 | A0A1C1CZY8 | A0A1C1CJC5 | Autophagy-related protein. | Ubiquitin-like domain-containing protein. | 0.663 |
ATG8 | atg12 | A0A1C1CZY8 | A0A1C1CXL5 | Autophagy-related protein. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | 0.957 |
ATG8 | atg3 | A0A1C1CZY8 | A0A1C1CPL9 | Autophagy-related protein. | Autophagy-related protein 3. | 0.999 |
ATG8 | nae1 | A0A1C1CZY8 | A0A1C1C966 | Autophagy-related protein. | NEDD8-activating enzyme E1 regulatory subunit. | 0.903 |
ATG8 | uba3 | A0A1C1CZY8 | A0A1C1CLE0 | Autophagy-related protein. | NEDD8-activating enzyme E1 catalytic subunit. | 0.910 |
CLCR_00220 | CLCR_05264 | A0A1C1D0B8 | A0A1C1CJC5 | Putative ubiquitin-protein ligase Ufd4. | Ubiquitin-like domain-containing protein. | 0.939 |
CLCR_00220 | nae1 | A0A1C1D0B8 | A0A1C1C966 | Putative ubiquitin-protein ligase Ufd4. | NEDD8-activating enzyme E1 regulatory subunit. | 0.866 |
CLCR_00220 | uba3 | A0A1C1D0B8 | A0A1C1CLE0 | Putative ubiquitin-protein ligase Ufd4. | NEDD8-activating enzyme E1 catalytic subunit. | 0.991 |
CLCR_05264 | ATG8 | A0A1C1CJC5 | A0A1C1CZY8 | Ubiquitin-like domain-containing protein. | Autophagy-related protein. | 0.663 |
CLCR_05264 | CLCR_00220 | A0A1C1CJC5 | A0A1C1D0B8 | Ubiquitin-like domain-containing protein. | Putative ubiquitin-protein ligase Ufd4. | 0.939 |
CLCR_05264 | SMT3 | A0A1C1CJC5 | A0A1C1CTX1 | Ubiquitin-like domain-containing protein. | Ubiquitin-like protein SMT3. | 0.951 |
CLCR_05264 | SMT3-2 | A0A1C1CJC5 | A0A1C1CUI6 | Ubiquitin-like domain-containing protein. | Ubiquitin-like protein SMT3. | 0.951 |
CLCR_05264 | UBC12 | A0A1C1CJC5 | A0A1C1CH91 | Ubiquitin-like domain-containing protein. | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | 0.999 |
CLCR_05264 | nae1 | A0A1C1CJC5 | A0A1C1C966 | Ubiquitin-like domain-containing protein. | NEDD8-activating enzyme E1 regulatory subunit. | 0.986 |
CLCR_05264 | uba3 | A0A1C1CJC5 | A0A1C1CLE0 | Ubiquitin-like domain-containing protein. | NEDD8-activating enzyme E1 catalytic subunit. | 0.999 |
SMT3 | CLCR_05264 | A0A1C1CTX1 | A0A1C1CJC5 | Ubiquitin-like protein SMT3. | Ubiquitin-like domain-containing protein. | 0.951 |
SMT3 | nae1 | A0A1C1CTX1 | A0A1C1C966 | Ubiquitin-like protein SMT3. | NEDD8-activating enzyme E1 regulatory subunit. | 0.849 |
SMT3 | uba3 | A0A1C1CTX1 | A0A1C1CLE0 | Ubiquitin-like protein SMT3. | NEDD8-activating enzyme E1 catalytic subunit. | 0.881 |
SMT3-2 | CLCR_05264 | A0A1C1CUI6 | A0A1C1CJC5 | Ubiquitin-like protein SMT3. | Ubiquitin-like domain-containing protein. | 0.951 |
SMT3-2 | nae1 | A0A1C1CUI6 | A0A1C1C966 | Ubiquitin-like protein SMT3. | NEDD8-activating enzyme E1 regulatory subunit. | 0.849 |
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