Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_07323 | CWC21 | A0A1C1CMU9 | A0A1C1D1X9 | mRNA splicing factor. | Pre-mRNA-splicing factor CWC21. | 0.767 |
CLCR_07323 | Cdc40 | A0A1C1CMU9 | A0A1C1CEA8 | mRNA splicing factor. | Pre-mRNA-processing factor 17. | 0.984 |
CLCR_07323 | SmE | A0A1C1CMU9 | A0A1C1C7Y4 | mRNA splicing factor. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.781 |
CLCR_07323 | cwc22 | A0A1C1CMU9 | A0A1C1CS21 | mRNA splicing factor. | Pre-mRNA-splicing factor cwc22. | 0.954 |
CLCR_07323 | dhx8 | A0A1C1CMU9 | A0A1C1C9L8 | mRNA splicing factor. | ATP-dependent RNA helicase dhx8. | 0.977 |
CLCR_07323 | slu7 | A0A1C1CMU9 | A0A1C1CJ91 | mRNA splicing factor. | Pre-mRNA-splicing factor slu7. | 0.996 |
CLCR_07323 | smd1 | A0A1C1CMU9 | A0A1C1CYG2 | mRNA splicing factor. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.736 |
CLCR_07323 | smd2 | A0A1C1CMU9 | A0A1C1C919 | mRNA splicing factor. | Small nuclear ribonucleoprotein Sm D2. | 0.704 |
CLCR_07323 | sub2 | A0A1C1CMU9 | A0A1C1CQ58 | mRNA splicing factor. | ATP-dependent RNA helicase sub2. | 0.644 |
CLCR_07323 | syf2 | A0A1C1CMU9 | A0A1C1CZM4 | mRNA splicing factor. | Pre-mRNA-splicing factor syf2. | 0.944 |
CWC21 | CLCR_07323 | A0A1C1D1X9 | A0A1C1CMU9 | Pre-mRNA-splicing factor CWC21. | mRNA splicing factor. | 0.767 |
CWC21 | Cdc40 | A0A1C1D1X9 | A0A1C1CEA8 | Pre-mRNA-splicing factor CWC21. | Pre-mRNA-processing factor 17. | 0.996 |
CWC21 | SmE | A0A1C1D1X9 | A0A1C1C7Y4 | Pre-mRNA-splicing factor CWC21. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.976 |
CWC21 | cwc22 | A0A1C1D1X9 | A0A1C1CS21 | Pre-mRNA-splicing factor CWC21. | Pre-mRNA-splicing factor cwc22. | 0.987 |
CWC21 | dhx8 | A0A1C1D1X9 | A0A1C1C9L8 | Pre-mRNA-splicing factor CWC21. | ATP-dependent RNA helicase dhx8. | 0.961 |
CWC21 | slu7 | A0A1C1D1X9 | A0A1C1CJ91 | Pre-mRNA-splicing factor CWC21. | Pre-mRNA-splicing factor slu7. | 0.979 |
CWC21 | smd1 | A0A1C1D1X9 | A0A1C1CYG2 | Pre-mRNA-splicing factor CWC21. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.973 |
CWC21 | smd2 | A0A1C1D1X9 | A0A1C1C919 | Pre-mRNA-splicing factor CWC21. | Small nuclear ribonucleoprotein Sm D2. | 0.976 |
CWC21 | sub2 | A0A1C1D1X9 | A0A1C1CQ58 | Pre-mRNA-splicing factor CWC21. | ATP-dependent RNA helicase sub2. | 0.742 |
CWC21 | syf2 | A0A1C1D1X9 | A0A1C1CZM4 | Pre-mRNA-splicing factor CWC21. | Pre-mRNA-splicing factor syf2. | 0.984 |
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