STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_06087Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
CLCR_09677
Tryptophan synthase.
    
  0.781
CLCR_08677
Putative iron-sulfur cluster-binding protein.
 
     0.685
gcv1
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 0.598
dad4
DASH complex subunit dad4.
   
 0.590
CLCR_01832
N,N-dimethylglycine oxidase.
   
 0.590
CLCR_07137
FAD dependent oxidoreductase superfamily protein.
   
 0.590
CLCR_08153
Uncharacterized protein.
   
 0.590
CLCR_09990
Putative fad dependent oxidoreductase protein.
   
 0.590
CLCR_10208
FAD dependent oxidoreductase superfamily protein.
   
 0.590
CLCR_02917
FAD dependent oxidoreductase family protein.
   
 0.590
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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