Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_01284 | CLCR_02903 | A0A1C1CCM4 | A0A1C1D2Z2 | Luc7-like protein. | DUF866 domain protein. | 0.930 |
CLCR_01284 | CLCR_05903 | A0A1C1CCM4 | A0A1C1CA62 | Luc7-like protein. | RRM domain-containing protein. | 0.991 |
CLCR_01284 | CLCR_08046 | A0A1C1CCM4 | A0A1C1CRS1 | Luc7-like protein. | RNA-binding protein RBM25. | 0.996 |
CLCR_01284 | CLCR_10742 | A0A1C1CCM4 | A0A1C1CWL3 | Luc7-like protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.974 |
CLCR_01284 | Cbp20 | A0A1C1CCM4 | A0A1C1CIF1 | Luc7-like protein. | Nuclear cap-binding protein subunit 2. | 0.970 |
CLCR_01284 | SmE | A0A1C1CCM4 | A0A1C1C7Y4 | Luc7-like protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.957 |
CLCR_01284 | lea1 | A0A1C1CCM4 | A0A1C1C7V9 | Luc7-like protein. | U2 small nuclear ribonucleoprotein A. | 0.971 |
CLCR_01284 | smd1 | A0A1C1CCM4 | A0A1C1CYG2 | Luc7-like protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.980 |
CLCR_01284 | smd2 | A0A1C1CCM4 | A0A1C1C919 | Luc7-like protein. | Small nuclear ribonucleoprotein Sm D2. | 0.947 |
CLCR_01284 | smg1 | A0A1C1CCM4 | A0A1C1CSE4 | Luc7-like protein. | Small nuclear ribonucleoprotein G. | 0.924 |
CLCR_02903 | CLCR_01284 | A0A1C1D2Z2 | A0A1C1CCM4 | DUF866 domain protein. | Luc7-like protein. | 0.930 |
CLCR_02903 | CLCR_05903 | A0A1C1D2Z2 | A0A1C1CA62 | DUF866 domain protein. | RRM domain-containing protein. | 0.992 |
CLCR_02903 | CLCR_08046 | A0A1C1D2Z2 | A0A1C1CRS1 | DUF866 domain protein. | RNA-binding protein RBM25. | 0.926 |
CLCR_02903 | CLCR_10742 | A0A1C1D2Z2 | A0A1C1CWL3 | DUF866 domain protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.994 |
CLCR_02903 | Cbp20 | A0A1C1D2Z2 | A0A1C1CIF1 | DUF866 domain protein. | Nuclear cap-binding protein subunit 2. | 0.994 |
CLCR_02903 | SmE | A0A1C1D2Z2 | A0A1C1C7Y4 | DUF866 domain protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
CLCR_02903 | lea1 | A0A1C1D2Z2 | A0A1C1C7V9 | DUF866 domain protein. | U2 small nuclear ribonucleoprotein A. | 0.996 |
CLCR_02903 | smd1 | A0A1C1D2Z2 | A0A1C1CYG2 | DUF866 domain protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
CLCR_02903 | smd2 | A0A1C1D2Z2 | A0A1C1C919 | DUF866 domain protein. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
CLCR_02903 | smg1 | A0A1C1D2Z2 | A0A1C1CSE4 | DUF866 domain protein. | Small nuclear ribonucleoprotein G. | 0.999 |
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