STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CETN1Centrin-1. (201 aa)    
Predicted Functional Partners:
CLCR_06536
SAC3/GANP family protein.
    
 
 0.942
CLCR_03830
Uncharacterized protein.
    
 0.918
CLCR_07940
Rad4 family protein.
    
 0.918
rhp23
UV excision repair protein rhp23.
   
 0.896
nudA
Dynein heavy chain, cytoplasmic.
    
 0.886
arp4
Actin-related protein 4; Belongs to the actin family.
   
 0.816
Dync1i2
Cytoplasmic dynein 1 intermediate chain 2.
    
 0.802
CLCR_03884
Putative acyltransferase.
    
 0.796
CLCR_04536
Protein kinase domain-containing protein.
    
 0.794
CLCR_06336
Uncharacterized protein.
    
   0.792
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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