Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_01291 | CLCR_05533 | A0A1C1CCF5 | A0A1C1CAE9 | Rhomboid-like protein. | RING finger ubiquitin ligase. | 0.895 |
CLCR_01291 | ucp10 | A0A1C1CCF5 | A0A1C1CNJ7 | Rhomboid-like protein. | UBX domain-containing protein 10. | 0.962 |
CLCR_05533 | CLCR_01291 | A0A1C1CAE9 | A0A1C1CCF5 | RING finger ubiquitin ligase. | Rhomboid-like protein. | 0.895 |
CLCR_05533 | CLCR_07286 | A0A1C1CAE9 | A0A1C1CM11 | RING finger ubiquitin ligase. | RING-type domain-containing protein. | 0.401 |
CLCR_05533 | CLCR_09156 | A0A1C1CAE9 | A0A1C1CSW1 | RING finger ubiquitin ligase. | C2 domain-containing protein. | 0.426 |
CLCR_05533 | fzo1 | A0A1C1CAE9 | A0A1C1CAC0 | RING finger ubiquitin ligase. | Transmembrane GTPase fzo1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.683 |
CLCR_05533 | hulA | A0A1C1CAE9 | A0A1C1CSV9 | RING finger ubiquitin ligase. | Putative E3 ubiquitin-protein ligase hulA. | 0.426 |
CLCR_05533 | ucp10 | A0A1C1CAE9 | A0A1C1CNJ7 | RING finger ubiquitin ligase. | UBX domain-containing protein 10. | 0.832 |
CLCR_07286 | CLCR_05533 | A0A1C1CM11 | A0A1C1CAE9 | RING-type domain-containing protein. | RING finger ubiquitin ligase. | 0.401 |
CLCR_09156 | CLCR_05533 | A0A1C1CSW1 | A0A1C1CAE9 | C2 domain-containing protein. | RING finger ubiquitin ligase. | 0.426 |
CLCR_09156 | hulA | A0A1C1CSW1 | A0A1C1CSV9 | C2 domain-containing protein. | Putative E3 ubiquitin-protein ligase hulA. | 0.923 |
fzo1 | CLCR_05533 | A0A1C1CAC0 | A0A1C1CAE9 | Transmembrane GTPase fzo1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | RING finger ubiquitin ligase. | 0.683 |
fzo1 | ucp10 | A0A1C1CAC0 | A0A1C1CNJ7 | Transmembrane GTPase fzo1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | UBX domain-containing protein 10. | 0.434 |
hulA | CLCR_05533 | A0A1C1CSV9 | A0A1C1CAE9 | Putative E3 ubiquitin-protein ligase hulA. | RING finger ubiquitin ligase. | 0.426 |
hulA | CLCR_09156 | A0A1C1CSV9 | A0A1C1CSW1 | Putative E3 ubiquitin-protein ligase hulA. | C2 domain-containing protein. | 0.923 |
ucp10 | CLCR_01291 | A0A1C1CNJ7 | A0A1C1CCF5 | UBX domain-containing protein 10. | Rhomboid-like protein. | 0.962 |
ucp10 | CLCR_05533 | A0A1C1CNJ7 | A0A1C1CAE9 | UBX domain-containing protein 10. | RING finger ubiquitin ligase. | 0.832 |
ucp10 | fzo1 | A0A1C1CNJ7 | A0A1C1CAC0 | UBX domain-containing protein 10. | Transmembrane GTPase fzo1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.434 |