STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps35Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (891 aa)    
Predicted Functional Partners:
vps29
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.999
vps26
Vacuolar protein sorting-associated protein 26.
   
 0.999
snx3
Sorting nexin-3.
   
 0.988
vps5
Vacuolar protein sorting-associated protein vps5.
   
 
 0.975
vps17
Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.
   
 0.962
CLCR_00007
TBC domain protein.
   
 
 0.860
VPS10
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 
 0.803
snx41
Sorting nexin-41.
   
 
 0.796
CLCR_06253
Putative Ras-related protein Rab7.
    
 
 0.786
snx4
Sorting nexin-4.
   
 
 0.783
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
Server load: low (22%) [HD]