Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_00007 | snx3 | A0A1C1D317 | A0A1C1CYU3 | TBC domain protein. | Sorting nexin-3. | 0.518 |
CLCR_00007 | vps26 | A0A1C1D317 | A0A1C1CU56 | TBC domain protein. | Vacuolar protein sorting-associated protein 26. | 0.841 |
CLCR_00007 | vps29 | A0A1C1D317 | A0A1C1CTN5 | TBC domain protein. | Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. | 0.962 |
CLCR_00007 | vps35 | A0A1C1D317 | A0A1C1CAZ4 | TBC domain protein. | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | 0.860 |
CLCR_06253 | vps26 | A0A1C1C8V6 | A0A1C1CU56 | Putative Ras-related protein Rab7. | Vacuolar protein sorting-associated protein 26. | 0.651 |
CLCR_06253 | vps29 | A0A1C1C8V6 | A0A1C1CTN5 | Putative Ras-related protein Rab7. | Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. | 0.651 |
CLCR_06253 | vps35 | A0A1C1C8V6 | A0A1C1CAZ4 | Putative Ras-related protein Rab7. | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | 0.786 |
CLCR_06253 | vps5 | A0A1C1C8V6 | A0A1C1CJW1 | Putative Ras-related protein Rab7. | Vacuolar protein sorting-associated protein vps5. | 0.491 |
VPS10 | snx3 | A0A1C1CKA1 | A0A1C1CYU3 | Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. | Sorting nexin-3. | 0.499 |
VPS10 | snx4 | A0A1C1CKA1 | A0A1C1CLB8 | Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. | Sorting nexin-4. | 0.745 |
VPS10 | snx41 | A0A1C1CKA1 | A0A1C1CZJ4 | Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. | Sorting nexin-41. | 0.596 |
VPS10 | vps17 | A0A1C1CKA1 | A0A1C1CPF3 | Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. | Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family. | 0.745 |
VPS10 | vps26 | A0A1C1CKA1 | A0A1C1CU56 | Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. | Vacuolar protein sorting-associated protein 26. | 0.790 |
VPS10 | vps29 | A0A1C1CKA1 | A0A1C1CTN5 | Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. | Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. | 0.559 |
VPS10 | vps35 | A0A1C1CKA1 | A0A1C1CAZ4 | Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | 0.803 |
VPS10 | vps5 | A0A1C1CKA1 | A0A1C1CJW1 | Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. | Vacuolar protein sorting-associated protein vps5. | 0.787 |
snx3 | CLCR_00007 | A0A1C1CYU3 | A0A1C1D317 | Sorting nexin-3. | TBC domain protein. | 0.518 |
snx3 | VPS10 | A0A1C1CYU3 | A0A1C1CKA1 | Sorting nexin-3. | Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. | 0.499 |
snx3 | snx4 | A0A1C1CYU3 | A0A1C1CLB8 | Sorting nexin-3. | Sorting nexin-4. | 0.525 |
snx3 | snx41 | A0A1C1CYU3 | A0A1C1CZJ4 | Sorting nexin-3. | Sorting nexin-41. | 0.561 |
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