STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_01483C6 zinc finger protein. (620 aa)    
Predicted Functional Partners:
CLCR_09677
Tryptophan synthase.
    
 0.802
CLCR_03711
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.675
CLCR_04094
Uncharacterized protein.
    
 0.659
CLCR_07166
Putative CDP-alcohol phosphatidyltransferase class-I family protein C22A12.08c.
    
 0.659
CLS
Putative cardiolipin synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.659
trpC
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
   
 0.641
paa1
Protein phosphatase PP2A regulatory subunit A.
    
  0.617
MgSUC1
Putative beta-Fructufuranosidase; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.611
MGST3
Microsomal glutathione S-transferase 3.
    
 0.602
CLCR_05581
Uncharacterized protein.
   
  0.558
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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