STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_01568Uncharacterized protein. (434 aa)    
Predicted Functional Partners:
HAL3A
Phosphopantothenoylcysteine decarboxylase.
  
 
 0.936
ndk1
Nucleoside diphosphate kinase.
    
 0.878
CLCR_07974
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.873
CDA
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.872
TMP1
Thymidylate synthase.
  
 
 0.869
CLCR_08977
Dihydrofolate reductase.
    
 0.848
CLCR_04350
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
  
 
 0.818
CLCR_04989
Epoxide hydrolase 2.
    
  0.810
CLCR_08815
Putative epoxide hydrolase.
    
  0.810
CLCR_10439
Epoxide hydrolase.
    
  0.810
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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