STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_01703DUF2012 domain-containing protein. (241 aa)    
Predicted Functional Partners:
CLCR_11384
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.978
CLCR_05081
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
   
 
 0.970
CLCR_09038
Uncharacterized protein.
    
 
 0.963
oca3
TPR repeat protein oca3.
   
 
 0.961
CLCR_06622
DUF1620 domain protein.
    
 
 0.959
CLCR_04407
Uncharacterized protein.
    
 
 0.881
CLCR_04330
Uncharacterized protein.
    
 
 0.881
LACS7
Long chain acyl-CoA synthetase 7, peroxisomal.
 
      0.780
CLCR_09168
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 
  0.616
CLCR_04294
Uncharacterized protein.
   
 
  0.608
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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