STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BET2Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (334 aa)    
Predicted Functional Partners:
CLCR_04145
Putative geranylgeranyl transferae type II alpha subunit.
    
 0.986
CLCR_11010
Rab15, 13, 10, 1, 35, 5, and.
    
 0.870
CLCR_00426
Uncharacterized protein.
 
      0.863
apsB
Anucleate primary sterigmata protein B.
    
 0.824
CLCR_06253
Putative Ras-related protein Rab7.
    
 0.812
CLCR_01701
Ras-related protein Rab-11B.
    
 0.811
CLCR_08302
ATP synthase regulation protein NCA2.
    
 0.807
ypt2
GTP-binding protein ypt2.
    
 0.807
RABB1B
Ras-related protein RABB1b.
    
 0.777
CLCR_02849
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
   
 0.751
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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