STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_00384Putative ABC transporter ATP-binding protein. (753 aa)    
Predicted Functional Partners:
gcn1
Translational activator gcn1.
   
 
 0.975
CLCR_02734
General stress response protein Whi2.
 
      0.897
tif211
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.831
NEW1
[NU+] prion formation protein 1.
   
 
0.798
TEF3
Elongation factor 3.
   
 
0.775
GCD11
Eukaryotic translation initiation factor 2 subunit gamma.
   
 0.767
rps23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.765
rps3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.761
rpl25b
60S ribosomal protein L25-B.
   
 
 0.759
RPL35
60S ribosomal protein L35.
   
 
 0.755
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.