STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_00356RhoGAP domain protein. (1364 aa)    
Predicted Functional Partners:
CLCR_03807
RhoGAP domain containing protein.
   
0.996
cdc42
Cell division control protein 42 like protein.
    
 0.962
rac1A
Rho-related protein rac1A.
    
 0.910
CLCR_10713
SH3 domain containing protein.
    
 0.827
CLCR_09570
Putative Rho GTPase activator (Rgd1).
   
0.766
rho2
GTP-binding protein rho2.
    
 0.762
rhoA
GTP-binding protein rhoA.
    
 0.739
rga1
Rho-type GTPase-activating protein 1.
    
 0.720
CLCR_11439
Cytokinesis protein.
    
 0.698
CLCR_02571
Rho protein.
    
 0.694
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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