STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_00477Putative nitronate monooxygenase. (353 aa)    
Predicted Functional Partners:
CLCR_10485
RNA methyltransferase, TrmH family.
  
 
 0.829
MSS1
tRNA modification GTPase MSS1, mitochondrial.
   
 
 0.826
mrpl8
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.820
CLCR_06682
Putative pseudouridine synthase TruD/Pus7.
    
 
 0.805
RPL26A
60S ribosomal protein L26-1.
   
   0.797
CLCR_03711
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.785
CLCR_03986
GTP-binding protein.
   
 
 0.782
rplC
50S ribosomal protein L3.
   
 
 0.768
CLCR_06056
Mitochondrial 54S ribosomal protein YmL10/YmL18.
  
   0.763
MRPL23
54S ribosomal protein L23, mitochondrial.
  
   0.760
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.