Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAT1-3 | nit2 | A0A1C1CSX0 | A0A1C1CC95 | Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | Putative hydrolase nit2. | 0.562 |
BNA6 | NMA2 | A0A1C1CAY3 | A0A1C1D0D8 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family. | 0.913 |
BNA6 | aguA | A0A1C1CAY3 | A0A1C1C7M6 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | Agmatine deiminase. | 0.483 |
BNA6 | nit2 | A0A1C1CAY3 | A0A1C1CC95 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | Putative hydrolase nit2. | 0.590 |
CLCR_00261 | accC-2 | A0A1C1D0D6 | A0A1C1D0I5 | Lipoyl-binding domain-containing protein. | Biotin carboxylase. | 0.979 |
CLCR_00261 | aguA | A0A1C1D0D6 | A0A1C1C7M6 | Lipoyl-binding domain-containing protein. | Agmatine deiminase. | 0.411 |
CLCR_00261 | atzF | A0A1C1D0D6 | A0A1C1CK80 | Lipoyl-binding domain-containing protein. | Allophanate hydrolase. | 0.968 |
CLCR_00261 | atzF-2 | A0A1C1D0D6 | A0A1C1CZN1 | Lipoyl-binding domain-containing protein. | Allophanate hydrolase. | 0.946 |
CLCR_00261 | lamA | A0A1C1D0D6 | A0A1C1CEZ5 | Lipoyl-binding domain-containing protein. | Putative urea carboxylase. | 0.770 |
CLCR_00261 | nit2 | A0A1C1D0D6 | A0A1C1CC95 | Lipoyl-binding domain-containing protein. | Putative hydrolase nit2. | 0.714 |
CLCR_00301 | aguA | A0A1C1D0E3 | A0A1C1C7M6 | Spermidine synthase; Belongs to the spermidine/spermine synthase family. | Agmatine deiminase. | 0.824 |
CLCR_00301 | nit2 | A0A1C1D0E3 | A0A1C1CC95 | Spermidine synthase; Belongs to the spermidine/spermine synthase family. | Putative hydrolase nit2. | 0.639 |
NMA2 | BNA6 | A0A1C1D0D8 | A0A1C1CAY3 | Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | 0.913 |
NMA2 | nit2 | A0A1C1D0D8 | A0A1C1CC95 | Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family. | Putative hydrolase nit2. | 0.619 |
accC-2 | CLCR_00261 | A0A1C1D0I5 | A0A1C1D0D6 | Biotin carboxylase. | Lipoyl-binding domain-containing protein. | 0.979 |
accC-2 | aguA | A0A1C1D0I5 | A0A1C1C7M6 | Biotin carboxylase. | Agmatine deiminase. | 0.411 |
accC-2 | atzF | A0A1C1D0I5 | A0A1C1CK80 | Biotin carboxylase. | Allophanate hydrolase. | 0.951 |
accC-2 | atzF-2 | A0A1C1D0I5 | A0A1C1CZN1 | Biotin carboxylase. | Allophanate hydrolase. | 0.937 |
accC-2 | lamA | A0A1C1D0I5 | A0A1C1CEZ5 | Biotin carboxylase. | Putative urea carboxylase. | 0.761 |
accC-2 | nit2 | A0A1C1D0I5 | A0A1C1CC95 | Biotin carboxylase. | Putative hydrolase nit2. | 0.714 |
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